GitHub

Algorithms and Data Structures (for Data Science)

The course introduces basic data structures and algorithmic techniques that allow students to solve computational problems on the most important data types, such as sequences, sets, trees, and graphs.
GitHub

Cell-GPS is the Python package and reference implementation for Cophenetic Spatial Topology Embedding (COSTE), a spatial topology analysis framework for spatial omics data.

If you use the Python package, the Windows executable, the R companion package, or the manuscript figure/table code, please cite this preprint.
C&EN

RamanSPy: An Open-Source Python Package for Integrative Raman Spectroscopy Data Analysis

Department of Computing & UKRI Centre for Doctoral Training in AI for Healthcare, Imperial College London, London SW7 2AZ, United Kingdom Department of Materials, Department of Bioengineering & ...
C&EN

PySyComp: A Symbolic Python Library for the Undergraduate Quantum Chemistry Course

We report an educational tool for the upper level undergraduate quantum chemistry or quantum physics course that uses a symbolic approach via the PySyComp Python library. The tool covers both ...
Frontiers

PROFASA—a web-based protein fragment and structure analysis workstation

Introduction: In the field of bioinformatics and computational biology, protein structure modelling and analysis is a crucial aspect. However, most existing tools require a high degree of technical ...
Frontiers

MEG and EEG data analysis with MNE-Python

Magnetoencephalography and electroencephalography (M/EEG) measure the weak electromagnetic signals generated by neuronal activity in the brain. Using these signals to characterize and locate neural ...